Phylogeography and population structure of the red stingray, Dasyatis akajei inferred by mitochondrial control region
Li, Ning; Chen, Xiao; Sun, Dianrong; Song, Na; Lin, Qin; Gao, Tianxiang; gaozhang@ouc.edu.cn
2015
发表期刊MITOCHONDRIAL DNA
卷号26期号:4页码:505-513
摘要The red stingray Dasyatis akajei is distributed in both marine and freshwater, but little is known about its phylogeography and population structure. We sampled 107 individuals from one freshwater region and 6 coastal localities within the distribution range of D. akajei. Analyses of the first hypervariable region of mitochondrial DNA control region of 474 bp revealed only 17 polymorphism sites that defined 28 haplotypes, with no unique haplotype for the freshwater population. A high level of haplotype diversity and low nucleotide diversity were observed in both marine (h = 0.9393 +/- 0.0104, pi = 0.0069 +/- 0.0040) and freshwater populations (h = 0.8333 +/- 0.2224, pi = 0.0084 +/- 0.0063). Significant level of genetic structure was detected between four marine populations (TZ, WZ, ND and ZZ) via both hierarchical molecular variance analysis (AMOVA) and pairwise FST (with two exceptions), which is unusual for elasmobranchs detected previously over such short geographical distance. However, limited sampling suggested that the freshwater population was not particularly distinct (p>0.05), but additional samples would be needed to confirm it. Demersal and slow-moving characters likely have contributed to the genetically heterogeneous population structure. The demographic history of D. akajei examined by mismatch distribution analyses, neutrality tests and Bayesian skyline analyses suggested a sudden population expansion dating to upper Pleistocene. The information on genetic diversity and genetic structure will have implications for the management of fisheries and conservation efforts.
部门归属[Li, Ning; Chen, Xiao; Song, Na; Gao, Tianxiang] Ocean Univ China, Inst Evolut & Marine Biodivers, Qingdao 266003, Peoples R China; [Sun, Dianrong; Lin, Qin] Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Guangzhou, Guangdong, Peoples R China ; LTO
关键词Control Region Dasyatis Akajei Demographic History Genetic Diversity Genetic Structure
学科领域Genetics & Heredity
文献类型期刊论文
条目标识符http://ir.scsio.ac.cn/handle/344004/14936
专题热带海洋环境国家重点实验室(LTO)
通讯作者gaozhang@ouc.edu.cn
推荐引用方式
GB/T 7714
Li, Ning,Chen, Xiao,Sun, Dianrong,et al. Phylogeography and population structure of the red stingray, Dasyatis akajei inferred by mitochondrial control region[J]. MITOCHONDRIAL DNA,2015,26(4):505-513.
APA Li, Ning.,Chen, Xiao.,Sun, Dianrong.,Song, Na.,Lin, Qin.,...&gaozhang@ouc.edu.cn.(2015).Phylogeography and population structure of the red stingray, Dasyatis akajei inferred by mitochondrial control region.MITOCHONDRIAL DNA,26(4),505-513.
MLA Li, Ning,et al."Phylogeography and population structure of the red stingray, Dasyatis akajei inferred by mitochondrial control region".MITOCHONDRIAL DNA 26.4(2015):505-513.
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