Abyssicoccus albus gen. nov., sp nov., a novel member of the family Staphylococcaceae isolated from marine sediment of the Indian Ocean
Jiang, Zhao; Yuan, Chang-Guo; Xiao, Min; Tian, Xin-Peng; Khan, Inam-Ullah; Kim, Chang-Jin; Zhi, Xiao-Yang; Li, Wen-Jun; Zhi, XY; Li, WJ (reprint author), Yunnan Univ, Yunnan Inst Microbiol, Kunming 650091, Peoples R China.; Li, WJ (reprint author), Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China.; Li, WJ (reprint author), Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Guangdong, Peoples R China.
2016
发表期刊ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
卷号109期号:8页码:1153-1160
摘要A Gram-stain positive, aerobic, non-motile, asporogenous, coccoid shaped bacterium, designated YIM M12140(T), was isolated from a marine sediment sample collected from the Indian Ocean. Phylogenetic analysis showed that strain YIM M12140(T) forms a separate clade within the family Staphylococcaceae. Strain YIM M12140(T) shares high 16S rRNA gene sequence similarity with Macrococcus brunensis DSM 19358(T) (92.9 %). The isolate was found to grow at 0-10 % (w/v) NaCl (optimum, 2-3 %), pH 6.0-10.0 (optimum, pH 8.0) and temperature 5-40 A degrees C (optimum, 28 A degrees C). The polar lipids were identified as diphosphatidylglycerol, phosphatidylglycerol, one unidentified aminophospholipid and two unidentified polar lipids. The major cellular fatty acids of the strain were identified as anteiso-C-15:0, -C-17:0, iso-C-16:0, anteiso-C-19:0 and C-20:0. The respiratory menaquinones were found to be MK-6 (94 %) and MK-7 (6 %). The cell wall amino acids were found to contain Lys, Ala, Glu, Gly, Asp, Ser and Thr. Whole cell sugars were identified as mannose, ribose, rhamnose, glucose, galactose and xylose. The G+C content of the genomic DNA of strain YIM M12140(T) was determined to be 42.4 mol %. Based on phenotypic, chemotaxonomic data and phylogenetic analysis, it is proposed that strain YIM M12140(T) represents a novel species of a new genus in the family Staphylococcaceae, for which the name Abyssicoccus albus gen. nov., sp. nov. is proposed. The type strain is YIM M12140(T) (= DSM 29158(T) = CCTCC AB 2014213(T)).
部门归属[Jiang, Zhao; Yuan, Chang-Guo; Khan, Inam-Ullah; Zhi, Xiao-Yang; Li, Wen-Jun] Yunnan Univ, Yunnan Inst Microbiol, Kunming 650091, Peoples R China; [Xiao, Min; Li, Wen-Jun] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China; [Xiao, Min; Li, Wen-Jun] Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Guangdong, Peoples R China; [Tian, Xin-Peng] Chinese Acad Sci, Key Lab Trop Marine Bioresources & Ecol, Guangzhou 510301, Guangdong, Peoples R China; [Tian, Xin-Peng] Chinese Acad Sci, RNAM Ctr Marine Microbiol, Guangzhou 510301, Guangdong, Peoples R China; [Tian, Xin-Peng] Guangdong Key Lab Marine Mat Med, Guangzhou 510301, Guangdong, Peoples R China; [Tian, Xin-Peng] Chinese Acad Sci, South China Sea Inst Oceanol, Guangzhou 510301, Guangdong, Peoples R China; [Kim, Chang-Jin] Korea Res Inst Biosci & Biotechnol, Microbial Resource Ctr, Daejeon 305806, South Korea ; LMB
关键词Abyssicoccus Albus Gen. Nov. Sp Nov. 16s Rrna Gene Phylogenetic Analysis Indian Ocean
学科领域Microbiology
文献类型期刊论文
条目标识符http://ir.scsio.ac.cn/handle/344004/15379
专题中科院海洋生物资源可持续利用重点实验室
通讯作者Zhi, XY; Li, WJ (reprint author), Yunnan Univ, Yunnan Inst Microbiol, Kunming 650091, Peoples R China.; Li, WJ (reprint author), Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China.; Li, WJ (reprint author), Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Guangdong, Peoples R China.
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Jiang, Zhao,Yuan, Chang-Guo,Xiao, Min,et al. Abyssicoccus albus gen. nov., sp nov., a novel member of the family Staphylococcaceae isolated from marine sediment of the Indian Ocean[J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,2016,109(8):1153-1160.
APA Jiang, Zhao.,Yuan, Chang-Guo.,Xiao, Min.,Tian, Xin-Peng.,Khan, Inam-Ullah.,...&Li, WJ .(2016).Abyssicoccus albus gen. nov., sp nov., a novel member of the family Staphylococcaceae isolated from marine sediment of the Indian Ocean.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,109(8),1153-1160.
MLA Jiang, Zhao,et al."Abyssicoccus albus gen. nov., sp nov., a novel member of the family Staphylococcaceae isolated from marine sediment of the Indian Ocean".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 109.8(2016):1153-1160.
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