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Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis
Li, YL; Kong, XY; Yu, ZN; Kong, J; Ma, S; Chen, LM; xykong@scsio.ac.cn
2009
Source PublicationAFRICAN JOURNAL OF BIOTECHNOLOGY
ISSN1684-5315
Volume8Issue:7Pages:1193-1202
AbstractGenetic structure and demographic history of shrimp Feneropenaeus chinensis were examined using sequence data from portions of the mitochondrial cytochrome c oxidase I (COI) gene. Samples of 91 individuals were collected from 5 localities over most of the species' range in the Yellow Sea and Bohai Sea. Variability was detected at a total of 20 nucleotide sites, defining 20 haplotypes of COI in this species. The detected level of variation was low, with H = 0.4816 +/- 0.0639 and pi = 0.0846 +/- 0.0711% respectively. Analysis of molecular variance and the conventional population statistic F-ST revealed no significant genetic structure throughout the range of F. chinensis. Both mismatch distribution analyses and neutrality tests suggested a late Pleistocene or Holocene population expansion (12,100 - 28,500 years ago) for the species, which was consistent with the geological period of formation of the Yellow Sea and Bohai Sea. These results indicated that F. chinensis in the Yellow Sea and Bohai Sea might have undergone a genetic bottleneck or founder event during the late Pleistocene globle glacial period.
Department[Li, Yu Long; Kong, Xiao Yu; Yu, Zi Niu] Chinese Acad Sci, S China Sea Inst Oceanol, Lab Marine Bioresource Sustainable Utilizat, Guangzhou 510301, Guangdong, Peoples R China; [Li, Yu Long; Ma, Shen; Chen, Li Mei] Ocean Univ China, Educ Minist China, Mariculture Res Lab, Qingdao 266003, Peoples R China; [Kong, Jie] Chinese Acad Fisheries Sci, Yellow Sea Inst Fisheries Res, Qingdao 266071, Peoples R China
KeywordCytochrome c Oxidase Subunit i Gene Feneropenaeus Chinensis Historical Demography Mtdna Population Expansion
Subject AreaBiotechnology & Applied Microbiology
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Indexed Bysci
Funding ProjectLMB
WOS IDWOS:000265253500005
Citation statistics
Cited Times:19[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.scsio.ac.cn/handle/344004/5126
Collection中科院海洋生物资源可持续利用重点实验室
Corresponding Authorxykong@scsio.ac.cn
Recommended Citation
GB/T 7714
Li, YL,Kong, XY,Yu, ZN,et al. Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis[J]. AFRICAN JOURNAL OF BIOTECHNOLOGY,2009,8(7):1193-1202.
APA Li, YL.,Kong, XY.,Yu, ZN.,Kong, J.,Ma, S.,...&xykong@scsio.ac.cn.(2009).Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis.AFRICAN JOURNAL OF BIOTECHNOLOGY,8(7),1193-1202.
MLA Li, YL,et al."Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis".AFRICAN JOURNAL OF BIOTECHNOLOGY 8.7(2009):1193-1202.
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